species:   Clros
pid:       PID2225
parent:    cro-mir-19
paralog:   
locus:     CADEHS020000003.2:2070875-2070937
matures:   ['UGAGAAGCUGGAUAGAUUC', '']
srr:       ERR5950930
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950930.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950930.cram CADEHS020000003.2:2070875-2070937

6 out of bounds
5 alignments
1 proper strand
1 stranded perfect matches

            **************      *************                  
AUCAAUCUUGUUCAGGGCCACAAUGAAUGGCGUCUUGCGGUCCUUGAGAAGCUGGAUAGAUUC
(((...(((.((.((((((.(((.((......))))).)))))).)).)))...)))......
--------------------------------------------UGAGAAGCUGGAUAGAUUC l=19 a=0 c
--------------------------------------------------------------- l=0 a=0 c*
----------------------------------UUGCGGUCCUU------------------ l=11 a=1 ma
--------------GGGCCACAAUGA------------------------------------- l=12 a=0 ma*

----------------------------------UUGCGGUCCUU------------------ l=11 a=1 (ma)

mb-01011
ax-1011001
ku-01
ss-100010011100
fn-001
